One could replace exposed bolts with security bolts such as these or similar.
http://www.mcmaster.com/#security-bolts/=6j6ewp
i thought about installing steel rod in the center of each side, 3ea (not the back against the house) and across the top. These would be powdercoated and anchored to the concrete pad with tamper resistant anchors. It would take a while to hack saw or sawzall your way through 1 or 1 1/4" steel rod. If the unit died, it could all be unbolted using the proper tools. The chances of theives having the tools to unbolt, i would think, are slim.
still just thinking about it...
Chain link fence usually has carriage bolts with a rounded heads so those wouldn't change anything, you take the nut off. Even if you used something more secure it would only take a short time to cut the fencing with a pair of heavy guage wire cutters.
The only way a chain link fence is halfway secure is when there is a dog inside the area. Where I used to work we even had someone cut through a wall of a heavy guage steel building and then took a bunch of computers, the security cameras got good video of them and they were caught.